Structure of PDB 3cpl Chain A Binding Site BS01
Receptor Information
>3cpl Chain A (length=275) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRWE
Ligand information
>3cpl Chain E (length=9) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ASNENAETM
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3cpl
Complete modification of TCR specificity and repertoire selection does not perturb a CD8+ T cell immunodominance hierarchy.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 S77 Y84 Q97 F116 T143 K146 W147 S150 A152 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 Q70 W73 S77 Y84 Q97 F116 T143 K146 W147 S150 A152 H155 Y156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3cpl
,
PDBe:3cpl
,
PDBj:3cpl
PDBsum
3cpl
PubMed
19047637
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
[
Back to BioLiP
]
