Structure of PDB 3ch1 Chain A Binding Site BS01
Receptor Information
>3ch1 Chain A (length=274) Species:
10090
(Mus musculus) [
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GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNLLRTDSPKAHVTHHPRSKGEVTLR
CWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLG
KEQNYTCRVYHEGLPEPLTLRWEP
Ligand information
>3ch1 Chain C (length=9) [
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EGPRNQDWL
Receptor-Ligand Complex Structure
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PDB
3ch1
Design of agonistic altered peptides for the robust induction of CTL directed towards H-2Db in complex with the melanoma-associated epitope gp100.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
Y7 R62 E63 K66 Q70 W73 V76 S77 Y84 L95 Q97 S99 T143 K146 W147 S150 G151 A152 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 R62 E63 K66 Q70 W73 V76 S77 Y84 L95 Q97 S99 T143 K146 W147 S150 G151 A152 H155 Y156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3ch1
,
PDBe:3ch1
,
PDBj:3ch1
PDBsum
3ch1
PubMed
19789338
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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