Structure of PDB 3caw Chain A Binding Site BS01

Receptor Information
>3caw Chain A (length=316) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KISYSPYTLKPVAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQLSD
LRMGRMTTQIEQSIWLARRDALLRKEKKHVFDGGEKIKNNYLLSHFQDLK
PGFLDGLKNEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALGSW
QTFEKFMVNLPLTVRPLIEYVEDPFPFDFHAWGEARKLAKIALDNQYDKV
PWGKIASAPFDVIVIKPAKTDVDKAVAQCQKWNLKLAVTSYMDHPVGVVH
AVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELSTQGPYLLKNKGTG
VGFDKLLEALTWYQLK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain3caw Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3caw Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family.
Resolution1.87 Å
Binding residue
(original residue number in PDB)		D155 E184 D206
Binding residue
(residue number reindexed from 1)		D143 E172 D194
Annotation score1
Enzymatic activity
Enzyme Commision number 4.2.1.113: o-succinylbenzoate synthase.
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0009234 menaquinone biosynthetic process
GO:0042372 phylloquinone biosynthetic process

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:3caw, PDBe:3caw, PDBj:3caw
PDBsum3caw
PubMed24872444
UniProtQ6MQC7|MENC_BDEBA o-succinylbenzoate synthase (Gene Name=menC)

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