Structure of PDB 3c0r Chain A Binding Site BS01

Receptor Information

>3c0r Chain A (length=175) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

RVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFKQDSVRDLREM
VSKEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGIISDALAVA
IYVVDIDAVKIEKFNEDKFDNYILILFNGIHYDSLTMNEFKTVFNKNQPE
SDDVLTAALQLASNLKQTGYSFNTH

Ligand information

Ligand ID

3CN

InChI

InChI=1S/C3H9N/c1-2-3-4/h2-4H2,1H3

InChIKey

WGYKZJWCGVVSQN-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04	NCCC
CACTVS 3.341 OpenEye OEToolkits 1.5.0	CCCN

Formula

C3 H9 N

Name

3-AMINOPROPANE

PDB chain

3c0r Chain B Residue 76 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	3c0r Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
Resolution	2.315 Å
Binding residue (original residue number in PDB)	D117 C120 W175 I221 H222
Binding residue (residue number reindexed from 1)	D26 C29 W84 I130 H131
Annotation score	1

Enzymatic activity

Enzyme Commision number

3.4.19.12: ubiquitinyl hydrolase 1.

External links

PDB	RCSB:3c0r, PDBe:3c0r, PDBj:3c0r
PDBsum	3c0r
PubMed	18270205
UniProt	P43558\|OTU1_YEAST Ubiquitin thioesterase OTU1 (Gene Name=OTU1)

[Back to BioLiP]