Structure of PDB 3by4 Chain A Binding Site BS01

Receptor Information
>3by4 Chain A (length=172) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFKQDSVRDLREM
VSKEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGIISDALAVA
IYVVDIDAVKIEKFNEDKFDNYILILFNGIHYDSLTMNEFKTVFNKNQPE
SDDVLTAALQLASNLKQTGYSF
Ligand information
Ligand ID3CN
InChIInChI=1S/C3H9N/c1-2-3-4/h2-4H2,1H3
InChIKeyWGYKZJWCGVVSQN-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04NCCC
CACTVS 3.341
OpenEye OEToolkits 1.5.0		CCCN
FormulaC3 H9 N
Name3-AMINOPROPANE
ChEMBLCHEMBL14409
DrugBank
ZINCZINC000016052656
PDB chain3by4 Chain B Residue 77 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3by4 Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
Resolution1.55 Å
Binding residue
(original residue number in PDB)		D117 N118 C120 W175 I221 H222
Binding residue
(residue number reindexed from 1)		D26 N27 C29 W84 I130 H131
Annotation score1
Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
External links
PDB RCSB:3by4, PDBe:3by4, PDBj:3by4
PDBsum3by4
PubMed18270205
UniProtP43558|OTU1_YEAST Ubiquitin thioesterase OTU1 (Gene Name=OTU1)

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