Structure of PDB 3bm3 Chain A Binding Site BS01

Receptor Information
>3bm3 Chain A (length=259) Species: 83521 (Pyrococcus sp. GI-H) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VRNLVIDITKKPTQNIPPTNEIIEEAITELNVDELLDRLFEKDESGEVIT
PSRIAKMLEEKAFEIYKEYEKQVREAYLSAGYSREKLEQSFQQARFSRGG
KAFEIIFTKLLNKFGIRYEHDRVIKIYDYITEGEKPAFIIPSVRTFLNDP
SSAILITVKRKVRERWREAVGEAQILRNKFGDEINFWFVGFDEEFTIYSA
IAMLDNGIDRVYVIDGRYDSLIEEIKRISDPNFNEDKYIQKIRRFSDIFD
DIIQFLNKH
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3bm3 Nucleotide flipping by restriction enzymes analyzed by 2-aminopurine steady-state fluorescence.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		E60 F64 Y67 Q93 R96 F97 S98 R99 G100 G101 E133 K160 R161 K162 R164 R166
Binding residue
(residue number reindexed from 1)		E59 F63 Y66 Q92 R95 F96 S97 R98 G99 G100 E132 K159 R160 K161 R163 R165
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0009036 type II site-specific deoxyribonuclease activity
Biological Process
GO:0009307 DNA restriction-modification system

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Molecular Function
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Biological Process
External links
PDB RCSB:3bm3, PDBe:3bm3, PDBj:3bm3
PDBsum3bm3
PubMed
UniProtO93646

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