Structure of PDB 3bhi Chain A Binding Site BS01
Receptor Information
>3bhi Chain A (length=275) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA
EGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP
FHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP
ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVT
VLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPV
YLALLPPDAEGPHGQFVSEKRVEQW
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
3bhi Chain A Residue 309 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3bhi
Human carbonyl reductase 1 is an s-nitrosoglutathione reductase
Resolution
2.27 Å
Binding residue
(original residue number in PDB)
G11 N13 K14 G15 I16 R37 R41 D62 N89 A90 G91 V137 S139 Y193 K197 P227 W229 V230 T232 M234
Binding residue
(residue number reindexed from 1)
G10 N12 K13 G14 I15 R36 R40 D61 N88 A89 G90 V136 S138 Y192 K196 P226 W228 V229 T231 M233
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.1.1.184
: carbonyl reductase (NADPH).
1.1.1.189
: prostaglandin-E2 9-reductase.
1.1.1.196
: 15-hydroxyprostaglandin-D dehydrogenase (NADP(+)).
1.1.1.197
: 15-hydroxyprostaglandin dehydrogenase (NADP(+)).
1.1.1.71
: alcohol dehydrogenase [NAD(P)(+)].
Gene Ontology
Molecular Function
GO:0004090
carbonyl reductase (NADPH) activity
GO:0005515
protein binding
GO:0008106
alcohol dehydrogenase (NADP+) activity
GO:0016491
oxidoreductase activity
GO:0016616
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016655
oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0047020
15-hydroxyprostaglandin-D dehydrogenase (NADP+) activity
GO:0047021
15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221
prostaglandin E2 9-reductase activity
GO:0160163
S-nitrosoglutathione reductase (NADPH) activity
Biological Process
GO:0006629
lipid metabolic process
GO:0006805
xenobiotic metabolic process
GO:0008211
glucocorticoid metabolic process
GO:0019371
cyclooxygenase pathway
GO:0030855
epithelial cell differentiation
GO:0042373
vitamin K metabolic process
GO:2000379
positive regulation of reactive oxygen species metabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0070062
extracellular exosome
GO:1903561
extracellular vesicle
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3bhi
,
PDBe:3bhi
,
PDBj:3bhi
PDBsum
3bhi
PubMed
18826943
UniProt
P16152
|CBR1_HUMAN Carbonyl reductase [NADPH] 1 (Gene Name=CBR1)
[
Back to BioLiP
]