Structure of PDB 3b6l Chain A Binding Site BS01

Receptor Information
>3b6l Chain A (length=129) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
Ligand information
Ligand IDSDS
InChIInChI=1S/C12H26O4S/c1-2-3-4-5-6-7-8-9-10-11-12-16-17(13,14)15/h2-12H2,1H3,(H,13,14,15)
InChIKeyMOTZDAYCYVMXPC-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341CCCCCCCCCCCCO[S](O)(=O)=O
OpenEye OEToolkits 1.5.0CCCCCCCCCCCCOS(=O)(=O)O
ACDLabs 10.04O=S(=O)(OCCCCCCCCCCCC)O
FormulaC12 H26 O4 S
NameDODECYL SULFATE
ChEMBLCHEMBL1204779
DrugBankDB03967
ZINCZINC000001532179
PDB chain3b6l Chain A Residue 2300 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3b6l Protecting role of cosolvents in protein denaturation by SDS: a structural study.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		S2060 C2064 N2065 D2066 G2067 R2068 T2069 P2070 S2072 R2073 N2074
Binding residue
(residue number reindexed from 1)		S60 C64 N65 D66 G67 R68 T69 P70 S72 R73 N74
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) E2035 N2046 D2048 S2050 D2052 N2059
Catalytic site (residue number reindexed from 1) E35 N46 D48 S50 D52 N59
Enzyme Commision number 3.2.1.17: lysozyme.
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity

View graph for
Molecular Function
External links
PDB RCSB:3b6l, PDBe:3b6l, PDBj:3b6l
PDBsum3b6l
PubMed18522744
UniProtP00698|LYSC_CHICK Lysozyme C (Gene Name=LYZ)

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