Structure of PDB 3b00 Chain A Binding Site BS01
Receptor Information
>3b00 Chain A (length=251) Species:
243274
(Thermotoga maritima MSB8) [
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EDWQLVWSQEFDDGVIDPNIWNFEIGNGHAKGIPGWGNGELEYYTDENAF
VENGCLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGKIEIRAKLPK
GKGIWPALWMLGNNIGEVGWPTCGEIDIMEMLGHDTRTVYGTAHGPGYSG
GASIGVAYHLPEGVPDFSEDFHIFSIEWDEDEVEWYVDGQLYHVLSKDEL
AELGLEWVFDHPFFLILNVAVGGYWPGYPDETTQFPQRMYIDYIRVYKDM
N
Ligand information
Ligand ID
16A
InChI
InChI=1S/C19H42N/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(2,3)4/h5-19H2,1-4H3/q+1
InChIKey
RLGQACBPNDBWTB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
C(CCCC[N+](C)(C)C)CCCCCCCCCCC
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CCCCCCCCCCCCCCCC[N+](C)(C)C
Formula
C19 H42 N
Name
CETYL-TRIMETHYL-AMMONIUM
ChEMBL
CHEMBL1183605
DrugBank
DB01718
ZINC
ZINC000006846023
PDB chain
3b00 Chain A Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
3b00
Crystal structures of the laminarinase catalytic domain from Thermotoga maritima MSB8 in complex with inhibitors: essential residues for beta-1,3 and beta-1,4 glucan selection.
Resolution
1.74 Å
Binding residue
(original residue number in PDB)
I40 W43 N45 R85 W116 W127 E132 E137
Binding residue
(residue number reindexed from 1)
I33 W36 N38 R78 W109 W120 E125 E130
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.2.1.39
: glucan endo-1,3-beta-D-glucosidase.
Gene Ontology
Molecular Function
GO:0004553
hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975
carbohydrate metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:3b00
,
PDBe:3b00
,
PDBj:3b00
PDBsum
3b00
PubMed
22065588
UniProt
Q9WXN1
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