Structure of PDB 3ak3 Chain A Binding Site BS01
Receptor Information
>3ak3 Chain A (length=210) Species:
272557
(Aeropyrum pernix K1) [
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MVSFKRYELPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKI
EKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGGTPGGRV
ADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPLTEELRILQVEKH
NVLMTAGLVPILVIDVWEHAYYLQYKNDRGSYVENWWNVVNWDDVEKRLE
QALNNAKPLY
Ligand information
Ligand ID
FE
InChI
InChI=1S/Fe/q+3
InChIKey
VTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
Formula
Fe
Name
FE (III) ION
ChEMBL
DrugBank
DB13949
ZINC
PDB chain
3ak3 Chain A Residue 215 [
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Receptor-Ligand Complex Structure
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PDB
3ak3
Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Resolution
1.48 Å
Binding residue
(original residue number in PDB)
H31 H79 D165 H169
Binding residue
(residue number reindexed from 1)
H31 H79 D165 H169
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.15.1.1
: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784
superoxide dismutase activity
GO:0016491
oxidoreductase activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006801
superoxide metabolic process
GO:0019430
removal of superoxide radicals
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3ak3
,
PDBe:3ak3
,
PDBj:3ak3
PDBsum
3ak3
PubMed
21182595
UniProt
Q9Y8H8
|SODF_AERPE Superoxide dismutase [Mn/Fe] (Gene Name=sod)
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