Structure of PDB 2zj3 Chain A Binding Site BS01

Receptor Information
>2zj3 Chain A (length=365) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRC
RRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDV
CFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINA
GPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDL
IKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMH
SEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRP
VVICDKEDTETIKNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGY
DVDFPRNLAKSVTVE
Ligand information
Ligand IDG6P
InChIInChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5-,6+/m1/s1
InChIKeyNBSCHQHZLSJFNQ-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)OP(=O)(O)O
CACTVS 3.341O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341O[C@H]1O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O
ACDLabs 10.04O=P(O)(O)OCC1OC(O)C(O)C(O)C1O
FormulaC6 H13 O9 P
Name6-O-phosphono-alpha-D-glucopyranose;
ALPHA-D-GLUCOSE-6-PHOSPHATE;
6-O-phosphono-alpha-D-glucose;
6-O-phosphono-D-glucose;
6-O-phosphono-glucose
ChEMBL
DrugBankDB02007
ZINCZINC000003875375
PDB chain2zj3 Chain A Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2zj3 Structural analysis of human glutamine:fructose-6-phosphate amidotransferase, a key regulator in type 2 diabetes
Resolution1.9 Å
Binding residue
(original residue number in PDB)
T375 S376 S420 Q421 S422 T425 V471 A674 K675
Binding residue
(residue number reindexed from 1)
T60 S61 S105 Q106 S107 T110 V156 A359 K360
Annotation score3
Enzymatic activity
Catalytic site (original residue number in PDB) E553 K557 E560 H576 K675
Catalytic site (residue number reindexed from 1) E238 K242 E245 H261 K360
Enzyme Commision number 2.6.1.16: glutamine--fructose-6-phosphate transaminase (isomerizing).
Gene Ontology
Molecular Function
GO:0097367 carbohydrate derivative binding
Biological Process
GO:1901135 carbohydrate derivative metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:2zj3, PDBe:2zj3, PDBj:2zj3
PDBsum2zj3
PubMed19059404
UniProtQ06210|GFPT1_HUMAN Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 (Gene Name=GFPT1)

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