Structure of PDB 2ypl Chain A Binding Site BS01

Receptor Information
>2ypl Chain A (length=274) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAP
WIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG
CDVGPDGRLLRGHDQYAYDGKDYIALNEDLSSWTAADTAAQIIQRKWEAA
RVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRW
Ligand information
>2ypl Chain C (length=11) Species: 12721 (Human immunodeficiency virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
KAFSPEVIPMF
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2ypl Structural Features Underlying T-Cell Receptor Sensitivity to Concealed Mhc Class I Micropolymorphisms.
Resolution2.4 Å
Binding residue
(original residue number in PDB)
Y7 Y59 E63 N66 T73 N77 I80 Y84 Y99 Y123 I143 K146 W147 Q155 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 Y59 E63 N66 T73 N77 I80 Y84 Y99 Y123 I143 K146 W147 Q155 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:2ypl, PDBe:2ypl, PDBj:2ypl
PDBsum2ypl
PubMed23161907
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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