Structure of PDB 2yjp Chain A Binding Site BS01
Receptor Information
>2yjp Chain A (length=247) Species:
242231
(Neisseria gonorrhoeae FA 1090) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLG
SPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKV
ALGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQN
TETFDALKDGRGVALAHDNALLWAWAKENPNFEVAIGNLGPAEFIAPAVQ
KGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPEALLAE
Ligand information
Ligand ID
CYS
InChI
InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1
InChIKey
XUJNEKJLAYXESH-REOHCLBHSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CS)C(O)=O
OpenEye OEToolkits 1.5.0
C([C@@H](C(=O)O)N)S
CACTVS 3.341
N[C@@H](CS)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CS
OpenEye OEToolkits 1.5.0
C(C(C(=O)O)N)S
Formula
C3 H7 N O2 S
Name
CYSTEINE
ChEMBL
CHEMBL863
DrugBank
DB00151
ZINC
ZINC000000895042
PDB chain
2yjp Chain A Residue 350 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2yjp
Crystal Structures of Two Solute Receptors for L-Cystine and L-Cysteine, Respectively, of the Human Pathogen Neisseria Gonorrhoeae.
Resolution
2.26 Å
Binding residue
(original residue number in PDB)
F55 K58 R102 N117 F118 T119 R124 T166 T167 H204 D205
Binding residue
(residue number reindexed from 1)
F18 K21 R65 N80 F81 T82 R87 T129 T130 H167 D168
Annotation score
4
Binding affinity
MOAD
: Kd=21nM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:2yjp
,
PDBe:2yjp
,
PDBj:2yjp
PDBsum
2yjp
PubMed
22138345
UniProt
Q5F5B5
[
Back to BioLiP
]