Structure of PDB 2y6i Chain A Binding Site BS01

Receptor Information
>2y6i Chain A (length=671) Species: 1498 (Hathewaya histolytica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TMYDFEYLNGLSYTELTNLIKNIKWNQINGLFNYSTGSQKFFGDKNRVQA
IINALQESGRTYTANDMKGIETFTEVLRAGFYLGYYNDGLSYLNDRNFQD
KCIPAMIAIQKNPNFKLGTAVQDEVITSLGKLIGNASANAEVVNNCVPVL
KQFRENLNQYAPDYVKGTAVNELIKGIEFDFSGAAYEKDVKTMPWYGKID
PFINELKALGLYGNITSATEWASDVGIYYLSKFGLYSTNRNDIVQSLEKA
VDMYKYGKIAFVAMERITWDYDGIGSNGKKVDHDKFLDDAEKHYLPKTYT
FDNGTFIIRAGDKVSEEKIKRLYWASREVKSQFHRVVGNDKALEVGNADD
VLTMKIFNSPEEYKFNTNINGVSTDNGGLYIEPRGTFYTYERTPQQSIFS
LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGSTR
TSGVLPRKLILGYLAKDKVDHRYSLKKTLNSDSDWMFYNYGFAVAHYLYE
KDMPTFIKMNKAILNTDVKSYDEIIKKLSDDANKNTEYQNHIQELVDKYQ
GAGIPLVSDDYLKDHGYKKASEVYSEISKAASLTNTSVTAEKSQYFNTFT
LRGTYTGETSKGEFKDWDEMSKKLDGTLESLAKNSWSGYKTLTAYFTNYR
VTSDNKVQYDVVFHGVLTDNG
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2y6i Structure of Collagenase G Reveals a Chew-and -Digest Mechanism of Bacterial Collagenolysis
Resolution3.25 Å
Binding residue
(original residue number in PDB)		G493 S513 L520 H523 E524 E555
Binding residue
(residue number reindexed from 1)		G377 S397 L404 H407 E408 E439
Enzymatic activity
Enzyme Commision number 3.4.24.3: microbial collagenase.
Gene Ontology
Molecular Function
GO:0004222 metalloendopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2y6i, PDBe:2y6i, PDBj:2y6i
PDBsum2y6i
PubMed21947205
UniProtQ9X721|COLG_HATHI Collagenase ColG (Gene Name=colG)

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