Structure of PDB 2y0o Chain A Binding Site BS01

Receptor Information
>2y0o Chain A (length=171) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GITKEEVNSYYQKAGIVLTDEEVDQIQLMDYGLGKERKVGLQLFVYVNTD
RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTP
LPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEEGAVVTEM
SSTSTDKHDIFTDPRILEHHH
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain2y0o Chain A Residue 1173 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2y0o The Structure of a D-Lyxose Isomerase from the Sigmab Regulon of Bacillus Subtilis
Resolution1.229 Å
Binding residue
(original residue number in PDB)		H69 H71 E82 H137
Binding residue
(residue number reindexed from 1)		H68 H70 E81 H136
Annotation score1
Enzymatic activity
Enzyme Commision number 5.3.1.15: D-lyxose ketol-isomerase.
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding
GO:0047828 D-lyxose ketol-isomerase activity

View graph for
Molecular Function
External links
PDB RCSB:2y0o, PDBe:2y0o, PDBj:2y0o
PDBsum2y0o
PubMed21520290
UniProtP96578|DLYKI_BACSU Probable D-lyxose ketol-isomerase (Gene Name=ydaE)

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