Structure of PDB 2xe4 Chain A Binding Site BS01

Receptor Information

>2xe4 Chain A (length=721) Species: 5664 (Leishmania major)

SAQPPIAAKKPHRVTLGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDP
AVIEHLNKEKVYFQARSADIAQLRDDIYAEHISHINEDDMSAPYVYGKYR
YYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEV
KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWG
PDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA
ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG
TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSN
YLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQ
MLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYK
VERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSI
QHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEF
LVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTT
MCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCG
LHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKE
SAIQQAFVCKHLKSTVRLLVR

Ligand information

>2xe4 Chain B (length=4) Species: 1760 (Actinomycetes)

FRVR

Receptor-Ligand Complex Structure

Structure summary

• PDB: 2xe4 Crystal Structure of Leishmania Major Oligopeptidase B Gives Insight Into the Enzymatic Properties of a Trypanosomatid Virulence Factor.
• Resolution: 1.65 Å
• Binding residue (original residue number in PDB): E226 S253 Y496 Y499 S577 A578 F603 L617 E621 R664 V665
• Binding residue (residue number reindexed from 1): E217 S244 Y487 Y490 S568 A569 F594 L608 E612 R655 V656

Enzymatic activity

• Catalytic site (original residue number in PDB): Y496 S577 D662 H697
• Catalytic site (residue number reindexed from 1): Y487 S568 D653 H688
• Enzyme Commision number: 3.4.21.-

Gene Ontology

Molecular Function

• GO:0004252 serine-type endopeptidase activity
• GO:0008236 serine-type peptidase activity
• GO:0016491 oxidoreductase activity
• GO:0070012 oligopeptidase activity

Biological Process

• GO:0006508 proteolysis

Cellular Component

• GO:0005737 cytoplasm
• GO:0005829 cytosol

External links

• PDB: RCSB:2xe4, PDBe:2xe4, PDBj:2xe4
• PDBsum: 2xe4
• PubMed: 20926390
• UniProt: Q4QHU7