Structure of PDB 2vy1 Chain A Binding Site BS01
Receptor Information
>2vy1 Chain A (length=163) Species:
3702
(Arabidopsis thaliana) [
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REHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAKDRGEKCP
TKVTNQVFRYAKKSGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKE
RGENVGSWRQACYKPLVNIACRHGWDIDAVFNAHPRLSIWYVPTKLRQLC
HLERNNAVAAAAA
Ligand information
>2vy1 Chain W (length=20) [
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agaaggaccagtggtccgta
Receptor-Ligand Complex Structure
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PDB
2vy1
Structural Basis for Leafy Floral Switch Function and Similarity with Helix-Turn-Helix Proteins.
Resolution
2.104 Å
Binding residue
(original residue number in PDB)
R237 T290 N291 R295 K307 Y377 T380 A398 A399
Binding residue
(residue number reindexed from 1)
R1 T54 N55 R59 K71 Y141 T144 A162 A163
Binding affinity
PDBbind-CN
: Kd=95nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:2vy1
,
PDBe:2vy1
,
PDBj:2vy1
PDBsum
2vy1
PubMed
18784751
UniProt
Q00958
|LFY_ARATH Protein LEAFY (Gene Name=LFY)
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