Structure of PDB 2vos Chain A Binding Site BS01
Receptor Information
>2vos Chain A (length=448) Species:
83332
(Mycobacterium tuberculosis H37Rv) [
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DEIASLLQVEHLLDQRWRIDPSLTRISALMDLLGSPQRSYPSIHIAGTNG
KTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATY
REIEPLVALIDQQSQASPAMSKFEVLTAMAFAAFADAPVDVAVVEVGMGG
RWDATNVINAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPSPDTV
AVIGRQVPKVMEVLLAESVRADASVAREDSEFAVLRRQIAVGGQVLQLQG
LGGVYSDIYLPLHGEHQAHNAVLALASVEAFFGAQLDGDAVRAGFAAVTS
PGRLERMRSAPTVFIDAAHNPAGASALAQTLAHEFDFRFLVGVLSVLGDK
DVDGILAALEPVFDSVVVTHNGSPRALDVEALALAAGERFGPDRVRTAEN
LRDAIDVATSLVDDAAADPDVAGRTGIVITGSVVTAGAARTLFGRDPQ
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
2vos Chain A Residue 1490 [
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Receptor-Ligand Complex Structure
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PDB
2vos
Structures of Mycobacterium Tuberculosisfolylpolyglutamate Synthase Complexed with Adp and Amppcp.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
T74 N75 G76 K77 T78 S79 H299 N303 R340 D353 A355 G360 A363
Binding residue
(residue number reindexed from 1)
T48 N49 G50 K51 T52 S53 H266 N270 R303 D316 A318 G323 A326
Annotation score
5
Enzymatic activity
Enzyme Commision number
6.3.2.17
: tetrahydrofolate synthase.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0000287
magnesium ion binding
GO:0004326
tetrahydrofolylpolyglutamate synthase activity
GO:0005524
ATP binding
GO:0008841
dihydrofolate synthase activity
GO:0016874
ligase activity
GO:0016881
acid-amino acid ligase activity
GO:0043531
ADP binding
GO:0046872
metal ion binding
GO:0050897
cobalt ion binding
Biological Process
GO:0006761
dihydrofolate biosynthetic process
GO:0009058
biosynthetic process
GO:0009396
folic acid-containing compound biosynthetic process
GO:0046901
tetrahydrofolylpolyglutamate biosynthetic process
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2vos
,
PDBe:2vos
,
PDBj:2vos
PDBsum
2vos
PubMed
18566510
UniProt
O53174
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