Structure of PDB 2v9p Chain A Binding Site BS01

Receptor Information
>2v9p Chain A (length=272) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TLNESKFDFGTMVQWAYDHKYAEESKIAYEYALAAGSDSNARAFLATNSQ
AKHVKDCATMVRHYLRAETQALSMPAYIKARCKLATGEGSWKSILTFFNY
QNIELITFINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGSV
LSFANHKSHFWLASLADTRAALVDDATHACWRYFDTYLRNALDGYPVSID
RKHKAAVQIKAPPLLVTSNIDVQAEDRYLYLHSRVQTFRFEQPCTDEQPF
NITDADWKSFFVRLWGRLDLID
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain2v9p Chain A Residue 1582 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2v9p Papillomavirus E1 Helicase Assembly Maintains an Asymmetric State in the Absence of DNA and Nucleotide Cofactors.
Resolution3.0 Å
Binding residue
(original residue number in PDB)
S440 D479
Binding residue
(residue number reindexed from 1)
S136 D175
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0005524 ATP binding
Biological Process
GO:0006260 DNA replication

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Molecular Function

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Biological Process
External links
PDB RCSB:2v9p, PDBe:2v9p, PDBj:2v9p
PDBsum2v9p
PubMed17881379
UniProtP03116|VE1_BPV1 Replication protein E1 (Gene Name=E1)

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