Structure of PDB 2v2k Chain A Binding Site BS01
Receptor Information
>2v2k Chain A (length=104) Species:
246196
(Mycolicibacterium smegmatis MC2 155) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCP
VEAIYYEDDVPDQWSSYAQANADFFAELGSPGGASKVGQTDNDPQAIKDL
PPQG
Ligand information
Ligand ID
F3S
InChI
InChI=1S/3Fe.4S
InChIKey
FCXHZBQOKRZXKS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
S1[Fe]S[Fe]2S[Fe]1S2
OpenEye OEToolkits 2.0.7
S1[Fe]2S[Fe]3[S]2[Fe]1S3
Formula
Fe3 S4
Name
FE3-S4 CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
2v2k Chain A Residue 107 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2v2k
The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
Y2 C20 C24 I25 I34 C39 D41 C42 G43 A44 C45
Binding residue
(residue number reindexed from 1)
Y2 C20 C24 I25 I34 C39 D41 C42 G43 A44 C45
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0046872
metal ion binding
GO:0051538
3 iron, 4 sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
View graph for
Molecular Function
External links
PDB
RCSB:2v2k
,
PDBe:2v2k
,
PDBj:2v2k
PDBsum
2v2k
PubMed
17577575
UniProt
P00215
|FER_MYCSM Ferredoxin (Gene Name=fdxA)
[
Back to BioLiP
]