Structure of PDB 2rjo Chain A Binding Site BS01
Receptor Information
>2rjo Chain A (length=322) Species:
398527
(Paraburkholderia phytofirmans PsJN) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LGQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIA
DIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNKPKDLH
PWDYNPNYVAHLSYDGVAYGEETATQLFKSMGGKGGVVALGGIFSNVPAI
ERKAGLDAALKKFPGIQLLDFQVADWNSQKAFPIMQAWMTRFNSKIKGVW
AANDDMALGAIEALRAEGLAGQIPVTGMDGTQPGLVAIKSGELVASVDWD
PFWLGGIGLSMGLQAKEKKIDLATLPKDRRESFCTATFVTKTNVQDVIAR
AASPKAEWNNLYARVAGPVVYR
Ligand information
Ligand ID
GAL
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-FPRJBGLDSA-N
SMILES
Software
SMILES
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 1.7.2
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
OpenEye OEToolkits 1.7.2
C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
Formula
C6 H12 O6
Name
beta-D-galactopyranose;
beta-D-galactose;
D-galactose;
galactose
ChEMBL
CHEMBL300520
DrugBank
ZINC
ZINC000002597049
PDB chain
2rjo Chain A Residue 368 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2rjo
Crystal structure of twin-arginine translocation pathway signal protein from Burkholderia phytofirmans.
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
R48 N52 Y55 D105 W130 N131 N183 P185 R189 W213 D266
Binding residue
(residue number reindexed from 1)
R11 N15 Y18 D68 W93 N94 N146 P148 R152 W176 D229
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:2rjo
,
PDBe:2rjo
,
PDBj:2rjo
PDBsum
2rjo
PubMed
UniProt
B2TEP5
[
Back to BioLiP
]