Structure of PDB 2r5z Chain A Binding Site BS01
Receptor Information
>2r5z Chain A (length=75) Species:
7227
(Drosophila melanogaster) [
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KKNPPQIYPWMKRVHLRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH
ALSLTERQIKIWFQNRRMKWKKEHK
Ligand information
>2r5z Chain C (length=20) [
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actctaagattaatcggctg
Receptor-Ligand Complex Structure
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PDB
2r5z
Functional specificity of a Hox protein mediated by the recognition of minor groove structure
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
H89 R105 T106 Y108 Q144 I147 N151 K155
Binding residue
(residue number reindexed from 1)
H15 R19 T20 Y22 Q58 I61 N65 K69
Binding affinity
PDBbind-CN
: Kd=8.63nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2r5z
,
PDBe:2r5z
,
PDBj:2r5z
PDBsum
2r5z
PubMed
17981120
UniProt
P09077
|SCR_DROME Homeotic protein Sex combs reduced (Gene Name=Scr)
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