Structure of PDB 2q0h Chain A Binding Site BS01
Receptor Information
>2q0h Chain A (length=241) Species:
1422
(Geobacillus stearothermophilus) [
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QMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNL
LEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNIT
LAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIAR
ALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFA
REVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
2q0h Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
2q0h
Crystal structures of the ATP-binding cassette (ABC) protein ArtP from Geobacillus stearothermophilus reveal a stable dimer in the post hydrolysis state and an asymmetry in the dimerization region
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
F11 V16 S36 G37 G39 K40 S41 T42
Binding residue
(residue number reindexed from 1)
F12 V17 S37 G38 G40 K41 S42 T43
Annotation score
5
Enzymatic activity
Enzyme Commision number
3.6.3.21
: Transferred entry: 7.4.2.1.
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0015424
ABC-type amino acid transporter activity
GO:0016887
ATP hydrolysis activity
GO:0046872
metal ion binding
Biological Process
GO:0003333
amino acid transmembrane transport
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Molecular Function
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Biological Process
External links
PDB
RCSB:2q0h
,
PDBe:2q0h
,
PDBj:2q0h
PDBsum
2q0h
PubMed
UniProt
D0VWX4
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