Structure of PDB 2p2n Chain A Binding Site BS01

Receptor Information
>2p2n Chain A (length=304) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKSIYVAYTGGTIGMEFHRPEMPDFTIHEYTPLMDSSDMTPEDWQHIAED
IKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAEL
RSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFAS
PNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISAD
VVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCM
SGKVNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRG
ELTP
Ligand information
Ligand IDASP
InChIInChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)/t2-/m0/s1
InChIKeyCKLJMWTZIZZHCS-REOHCLBHSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(C(=O)O)N)C(=O)O
OpenEye OEToolkits 1.7.0C([C@@H](C(=O)O)N)C(=O)O
CACTVS 3.370N[CH](CC(O)=O)C(O)=O
CACTVS 3.370N[C@@H](CC(O)=O)C(O)=O
ACDLabs 12.01O=C(O)CC(N)C(=O)O
FormulaC4 H7 N O4
NameASPARTIC ACID
ChEMBLCHEMBL274323
DrugBankDB00128
ZINCZINC000000895032
PDB chain2p2n Chain A Residue 7001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2p2n Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia colil-Asparaginase I
Resolution1.9 Å
Binding residue
(original residue number in PDB)
T14 D59 S60 G90 T91 D92
Binding residue
(residue number reindexed from 1)
T12 D35 S36 G66 T67 D68
Annotation score5
Enzymatic activity
Catalytic site (original residue number in PDB) T14 T91 D92 K163
Catalytic site (residue number reindexed from 1) T12 T67 D68 K139
Enzyme Commision number 3.5.1.1: asparaginase.
Gene Ontology
Molecular Function
GO:0004067 asparaginase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0033345 asparagine catabolic process via L-aspartate
GO:0051289 protein homotetramerization
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2p2n, PDBe:2p2n, PDBj:2p2n
PDBsum2p2n
PubMed17451745
UniProtP0A962|ASPG1_ECOLI L-asparaginase 1 (Gene Name=ansA)

[Back to BioLiP]