Structure of PDB 2nyq Chain A Binding Site BS01
Receptor Information
>2nyq Chain A (length=291) Species:
671
(Vibrio proteolyticus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MPPITQQATVTAWLPQVDASQITGTISSLESFTNRFYTTTSGAQASDWIA
SEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDS
TIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAA
EEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSN
FTQYLTQLMDEYLPSLTYGFDTCGYACSDHASWHNAGYPAAMPFESKFND
YNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATG
Ligand information
>2nyq Chain B (length=1) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
W
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2nyq
Substrate recognition by the leucine aminopeptidase from Vibrio proteolyticus
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
D117 E151 D179 M180 Y225 C227 F244 F248
Binding residue
(residue number reindexed from 1)
D117 E151 D179 M180 Y225 C227 F244 F248
Enzymatic activity
Catalytic site (original residue number in PDB)
H97 D117 E151 E152 D179 H256
Catalytic site (residue number reindexed from 1)
H97 D117 E151 E152 D179 H256
Enzyme Commision number
3.4.11.10
: bacterial leucyl aminopeptidase.
Gene Ontology
Molecular Function
GO:0008235
metalloexopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2nyq
,
PDBe:2nyq
,
PDBj:2nyq
PDBsum
2nyq
PubMed
UniProt
Q01693
|AMPX_VIBPR Bacterial leucyl aminopeptidase
[
Back to BioLiP
]