Structure of PDB 2jea Chain A Binding Site BS01
Receptor Information
>2jea Chain A (length=274) Species:
2287
(Saccharolobus solfataricus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GHMSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAK
KADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETF
EPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLD
YGGNVLDACTLASVAALYNTKVYKVEQHISVNKNEVVGKLPLNYPVVTIS
VAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDI
DQAENTARSTAVKLLEELKKHLGI
Ligand information
>2jea Chain C (length=7) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaaaaaa
.......
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2jea
RNA Channelling by the Archaeal Exosome.
Resolution
2.33 Å
Binding residue
(original residue number in PDB)
Y75 R112
Binding residue
(residue number reindexed from 1)
Y77 R114
Enzymatic activity
Enzyme Commision number
3.1.13.-
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0035925
mRNA 3'-UTR AU-rich region binding
Biological Process
GO:0006401
RNA catabolic process
GO:0016075
rRNA catabolic process
Cellular Component
GO:0000177
cytoplasmic exosome (RNase complex)
GO:0000178
exosome (RNase complex)
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2jea
,
PDBe:2jea
,
PDBj:2jea
PDBsum
2jea
PubMed
17380186
UniProt
Q9UXC0
|RRP42_SACS2 Exosome complex component Rrp42 (Gene Name=rrp42)
[
Back to BioLiP
]