Structure of PDB 2je4 Chain A Binding Site BS01
Receptor Information
>2je4 Chain A (length=99) Species:
11676
(Human immunodeficiency virus 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEELNLPGKWKPKLIGGI
GGFIKVRQYDQIPVEITGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF
Ligand information
>2je4 Chain C (length=6) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
SLNGIV
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2je4
Modular Total Chemical Synthesis of a Human Immunodeficiency Virus Type 1 Protease.
Resolution
1.07 Å
Binding residue
(original residue number in PDB)
R8 D25 G27 D29 D30 I47 G48 G49 I50
Binding residue
(residue number reindexed from 1)
R8 D25 G27 D29 D30 I47 G48 G49 I50
Enzymatic activity
Catalytic site (original residue number in PDB)
D25 T26 G27
Catalytic site (residue number reindexed from 1)
D25 T26 G27
Enzyme Commision number
2.7.7.-
2.7.7.49
: RNA-directed DNA polymerase.
2.7.7.7
: DNA-directed DNA polymerase.
3.1.-.-
3.1.13.2
: exoribonuclease H.
3.1.26.13
: retroviral ribonuclease H.
3.4.23.16
: HIV-1 retropepsin.
Gene Ontology
Molecular Function
GO:0004190
aspartic-type endopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2je4
,
PDBe:2je4
,
PDBj:2je4
PDBsum
2je4
PubMed
17705484
UniProt
P03369
|POL_HV1A2 Gag-Pol polyprotein (Gene Name=gag-pol)
[
Back to BioLiP
]