Structure of PDB 2ime Chain A Binding Site BS01
Receptor Information
>2ime Chain A (length=203) Species:
303
(Pseudomonas putida) [
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MIVDFYFDFLSPFSYLANQRLSKLAQDYGLTIRYNAIDLARVKIAIGNVG
PSNRDLKVKLDYLKVDLQRWAQLYGIPLVFPANYNSRRMNIGFYYSGAEA
QAAAYVNVVFNAVWGEGIAPDLESLPALVSEKLGWDRSAFEHFLSSNAAT
ERYDEQTHAAIERKVFGVPTMFLGDEMWWGNDRLFMLESAMGRLCRQNAD
LSS
Ligand information
Ligand ID
GSH
InChI
InChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1
InChIKey
RWSXRVCMGQZWBV-WDSKDSINSA-N
SMILES
Software
SMILES
ACDLabs 12.01
O=C(NCC(=O)O)C(NC(=O)CCC(C(=O)O)N)CS
OpenEye OEToolkits 1.7.6
C(CC(=O)N[C@@H](CS)C(=O)NCC(=O)O)[C@@H](C(=O)O)N
CACTVS 3.370
N[CH](CCC(=O)N[CH](CS)C(=O)NCC(O)=O)C(O)=O
CACTVS 3.370
N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
OpenEye OEToolkits 1.7.6
C(CC(=O)NC(CS)C(=O)NCC(=O)O)C(C(=O)O)N
Formula
C10 H17 N3 O6 S
Name
GLUTATHIONE
ChEMBL
CHEMBL1543
DrugBank
DB00143
ZINC
ZINC000003830891
PDB chain
2ime Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
2ime
2-Hydroxychromene-2-carboxylic Acid Isomerase: A Kappa Class Glutathione Transferase from Pseudomonas putida
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
S11 F13 G167 V168 W179 G180 N181 D182
Binding residue
(residue number reindexed from 1)
S11 F13 G167 V168 W179 G180 N181 D182
Annotation score
1
Binding affinity
MOAD
: Kd=14uM
Enzymatic activity
Catalytic site (original residue number in PDB)
S11 V168 W179 N181 D182
Catalytic site (residue number reindexed from 1)
S11 V168 W179 N181 D182
Enzyme Commision number
5.99.1.4
: 2-hydroxychromene-2-carboxylate isomerase.
Gene Ontology
Molecular Function
GO:0004364
glutathione transferase activity
GO:0004602
glutathione peroxidase activity
GO:0016491
oxidoreductase activity
GO:0016853
isomerase activity
GO:0018845
2-hydroxychromene-2-carboxylate isomerase activity
Biological Process
GO:0006749
glutathione metabolic process
GO:0009056
catabolic process
GO:0098869
cellular oxidant detoxification
GO:1901170
naphthalene catabolic process
Cellular Component
GO:0005777
peroxisome
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2ime
,
PDBe:2ime
,
PDBj:2ime
PDBsum
2ime
PubMed
17508726
UniProt
Q51948
|NAHD_PSEPU 2-hydroxychromene-2-carboxylate isomerase (Gene Name=nahD)
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