Structure of PDB 2f5x Chain A Binding Site BS01
Receptor Information
>2f5x Chain A (length=299) Species:
257313
(Bordetella pertussis Tohama I) [
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YPERPVNMVVPFAAGGPTDNVARSLAESMRPTLGETVVVENKGGAGGTIG
TTQVARAQPDGYSILLMHAGFSTAPSLYKNPGYEPYTSFEPIGLVVDVPM
TIIARGDFPPNNIKELAEYVKKNADKISLANAGIGAASHLCGTMLVEALG
VNLLTIPYKGTAPAMNDLLGKQVDLMCDQTTNTTQQITSGKVKAYAVTSL
KRVPTLPDLPTMDESGYKGFEVGIWHGMWAPKGTPKPVVDKLVKSLQAGL
ADPKFQERMKQLGAEVLTNEANPEALQAKVKQQVPQWAELFKKAGVEKQ
Ligand information
Ligand ID
ASP
InChI
InChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)/t2-/m0/s1
InChIKey
CKLJMWTZIZZHCS-REOHCLBHSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
C(C(C(=O)O)N)C(=O)O
OpenEye OEToolkits 1.7.0
C([C@@H](C(=O)O)N)C(=O)O
CACTVS 3.370
N[CH](CC(O)=O)C(O)=O
CACTVS 3.370
N[C@@H](CC(O)=O)C(O)=O
ACDLabs 12.01
O=C(O)CC(N)C(=O)O
Formula
C4 H7 N O4
Name
ASPARTIC ACID
ChEMBL
CHEMBL274323
DrugBank
DB00128
ZINC
ZINC000000895032
PDB chain
2f5x Chain A Residue 901 [
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Receptor-Ligand Complex Structure
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PDB
2f5x
Crystal Structure of Bordetella pertussis BugD Solute Receptor Unveils the Basis of Ligand Binding in a New Family of Periplasmic Binding Proteins
Resolution
1.72 Å
Binding residue
(original residue number in PDB)
F13 P18 T19 H69 A133 A137 A138 S139 G161 T162
Binding residue
(residue number reindexed from 1)
F12 P17 T18 H68 A132 A136 A137 S138 G160 T161
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:2f5x
,
PDBe:2f5x
,
PDBj:2f5x
PDBsum
2f5x
PubMed
16403514
UniProt
Q7VTS1
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