Structure of PDB 2etj Chain A Binding Site BS01
Receptor Information
>2etj Chain A (length=211) Species:
2336
(Thermotoga maritima) [
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MGIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIEAKRERLLDE
IMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKG
IELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKH
KGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENR
FERILNLLGAR
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
2etj Chain A Residue 239 [
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Receptor-Ligand Complex Structure
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PDB
2etj
Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution
Resolution
1.74 Å
Binding residue
(original residue number in PDB)
D18 D107
Binding residue
(residue number reindexed from 1)
D18 D97
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.1.26.4
: ribonuclease H.
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0003723
RNA binding
GO:0004519
endonuclease activity
GO:0004523
RNA-DNA hybrid ribonuclease activity
GO:0030145
manganese ion binding
GO:0046872
metal ion binding
Biological Process
GO:0006298
mismatch repair
GO:0006401
RNA catabolic process
GO:0043137
DNA replication, removal of RNA primer
Cellular Component
GO:0005737
cytoplasm
GO:0032299
ribonuclease H2 complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2etj
,
PDBe:2etj
,
PDBj:2etj
PDBsum
2etj
PubMed
UniProt
Q9X017
|RNH2_THEMA Ribonuclease HII (Gene Name=rnhB)
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