Structure of PDB 2e52 Chain A Binding Site BS01
Receptor Information
>2e52 Chain A (length=299) Species:
71421
(Haemophilus influenzae Rd KW20) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILP
EAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKE
FNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPT
TKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSK
KTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKE
YWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL
Ligand information
>2e52 Chain E (length=12) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gccaagcttggc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2e52
Structures of restriction endonuclease HindIII in complex with its cognate DNA and divalent cations
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
L49 E60 S64 R88 G89 N90 D93 S111 F112 R113 R116 T117 A118 D123 K125 W132
Binding residue
(residue number reindexed from 1)
L49 E60 S64 R88 G89 N90 D93 S111 F112 R113 R116 T117 A118 D123 K125 W132
Enzymatic activity
Enzyme Commision number
3.1.21.4
: type II site-specific deoxyribonuclease.
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
GO:0009036
type II site-specific deoxyribonuclease activity
Biological Process
GO:0009307
DNA restriction-modification system
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2e52
,
PDBe:2e52
,
PDBj:2e52
PDBsum
2e52
PubMed
19966419
UniProt
P43870
|T2D3_HAEIN Type II restriction enzyme HindIII (Gene Name=hindIIIR)
[
Back to BioLiP
]