Structure of PDB 2d0d Chain A Binding Site BS01

Receptor Information
>2d0d Chain A (length=271) Species: 294 (Pseudomonas fluorescens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NLEIGKSILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALS
KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGN
SFGGGLAIATALRYSERVDRMVLMGAVGTRFDVTEGLNAVWGYTPSIENM
RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL
ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGH
WTQIEQTDRFNRLVVEFFNEA
Ligand information
Ligand IDCL
InChIInChI=1S/ClH/h1H/p-1
InChIKeyVEXZGXHMUGYJMC-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Cl-]
FormulaCl
NameCHLORIDE ION
ChEMBL
DrugBankDB14547
ZINC
PDB chain2d0d Chain A Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2d0d Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01
Resolution1.65 Å
Binding residue
(original residue number in PDB)		S34 S103 F104
Binding residue
(residue number reindexed from 1)		S32 S101 F102
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) S34 G35 G37 N102 S103 F104 G127 V142 R174 F187 D224 H252 W253
Catalytic site (residue number reindexed from 1) S32 G33 G35 N100 S101 F102 G125 V140 R172 F185 D222 H250 W251
Enzyme Commision number 3.7.1.9: 2-hydroxymuconate-6-semialdehyde hydrolase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016787 hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:2d0d, PDBe:2d0d, PDBj:2d0d
PDBsum2d0d
PubMed16844437
UniProtP96965

[Back to BioLiP]