Structure of PDB 2cm9 Chain A Binding Site BS01

Receptor Information
>2cm9 Chain A (length=146) Species: 6938 (Ornithodoros moubata) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DCTGSEPVDAFQAFSEGKEAYVLVRSTDPKARDCLKGEPAGEKQDNTLPV
MMTFKQGTDWASTDWTFTLDGAKVTATLGQLTQNREVVYDSQSHHCHVDK
VEKEVPDYEMWMLDAGGLEVEVECCRQKLEELASGRNQMYPHLKDC
Ligand information
Ligand IDRCL
InChIInChI=1S/C18H34O3/c1-2-3-4-11-14-17(19)15-12-9-7-5-6-8-10-13-16-18(20)21/h9,12,17,19H,2-8,10-11,13-16H2,1H3,(H,20,21)/b12-9+/t17-/m1/s1
InChIKeyWBHHMMIMDMUBKC-XLNAKTSKSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CCCCCCC(CC=CCCCCCCCC(=O)O)O
ACDLabs 10.04O=C(O)CCCCCCC/C=C/CC(O)CCCCCC
CACTVS 3.341CCCCCC[C@@H](O)C/C=C/CCCCCCCC(O)=O
CACTVS 3.341CCCCCC[CH](O)CC=CCCCCCCCC(O)=O
OpenEye OEToolkits 1.5.0CCCCCC[C@H](C\C=C\CCCCCCCC(=O)O)O
FormulaC18 H34 O3
NameRICINOLEIC ACID
ChEMBLCHEMBL1235634
DrugBank
ZINCZINC000003875925
PDB chain2cm9 Chain A Residue 1169 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2cm9 The Structure of Omci, a Novel Lipocalin Inhibitor of the Complement System.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		F36 Y43 R54 L57 W87 F89 R107 H119 D121 W133
Binding residue
(residue number reindexed from 1)		F14 Y21 R32 L35 W65 F67 R85 H97 D99 W111
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0035821 modulation of process of another organism
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2cm9, PDBe:2cm9, PDBj:2cm9
PDBsum2cm9
PubMed17445829
UniProtQ5YD59|C5I_ORNMO Complement inhibitor

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