Structure of PDB 2c8v Chain A Binding Site BS01
Receptor Information
>2c8v Chain A (length=271) Species:
354
(Azotobacter vinelandii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AMRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILH
SKAQNTIMEMAAEAGTVEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGR
GVITAINFLEEEGAYEDDLDFVFYDVGDVVCGGFAMPIRENKAQEIYIVC
SGEMMAMYAANNISKGIVKYANSGSVRLGGLICNSRNTDREDELIIALAN
KLGTQMIHFVPRDNVVQRAEIRRMTVIEYDPKAKQADEYRALARKVVDNK
LLVIPNPITMDELEELLMEFG
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
2c8v Chain A Residue 290 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2c8v
Insights Into the Role of Nucleotide-Dependent Conformational Change in Nitrogenase Catalysis: Structural Characterization of the Nitrogenase Fe Protein Leu127 Deletion Variant with Bound Mgatp.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
C97 G272
Binding residue
(residue number reindexed from 1)
C97 G271
Annotation score
3
Enzymatic activity
Catalytic site (original residue number in PDB)
K10 K15 K41 D129
Catalytic site (residue number reindexed from 1)
K10 K15 K41 D128
Enzyme Commision number
1.18.6.1
: nitrogenase.
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016163
nitrogenase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0009399
nitrogen fixation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2c8v
,
PDBe:2c8v
,
PDBj:2c8v
PDBsum
2c8v
PubMed
16616373
UniProt
P00459
|NIFH1_AZOVI Nitrogenase iron protein 1 (Gene Name=nifH1)
[
Back to BioLiP
]