Structure of PDB 2bj7 Chain A Binding Site BS01
Receptor Information
>2bj7 Chain A (length=136) Species:
70601
(Pyrococcus horikoshii OT3) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MELIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWEVG
NEEVAGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEV
IVVKGEAKKIKMIADKLLSLKGVKHGKLVMTSTGKE
Ligand information
Ligand ID
NI
InChI
InChI=1S/Ni/q+2
InChIKey
VEQPNABPJHWNSG-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ni++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ni+2]
Formula
Ni
Name
NICKEL (II) ION
ChEMBL
DrugBank
DB14204
ZINC
PDB chain
2bj7 Chain A Residue 1137 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2bj7
Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
H89 H91 C97
Binding residue
(residue number reindexed from 1)
H89 H91 C97
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0016151
nickel cation binding
GO:0046872
metal ion binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0010045
response to nickel cation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2bj7
,
PDBe:2bj7
,
PDBj:2bj7
PDBsum
2bj7
PubMed
15826657
UniProt
O58316
|NIKR_PYRHO Putative nickel-responsive regulator (Gene Name=PH0601)
[
Back to BioLiP
]