Structure of PDB 2bam Chain A Binding Site BS01
Receptor Information
>2bam Chain A (length=207) Species:
1390
(Bacillus amyloliquefaciens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MEVEKEFITDEAKELLSKDKLIQQAYNEVKTSICSPIWPATSKTFTINNT
EKNCNGVVPIKELCYTLLEDTYNWYREKPLDILKLEKKKGGPIDVYKEFI
ENSELKRVGMEFETGNISSAHRSMNKLLLGLKHGEIDLAIILMPIKQLAY
YLTDRVTNFEELEPYFELTEGQPFIFIGFNAEAYNSNVPLIPKGSDGMSK
RSIKKWK
Ligand information
>2bam Chain C (length=12) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tatggatccata
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2bam
The role of metals in catalysis by the restriction endonuclease BamHI.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
K146 Y150 R155 D196 G197 M198 S202 I203 W206
Binding residue
(residue number reindexed from 1)
K146 Y150 R155 D196 G197 M198 S202 I203 W206
Enzymatic activity
Enzyme Commision number
3.1.21.4
: type II site-specific deoxyribonuclease.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0009036
type II site-specific deoxyribonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0009307
DNA restriction-modification system
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2bam
,
PDBe:2bam
,
PDBj:2bam
PDBsum
2bam
PubMed
9783752
UniProt
P23940
|T2BA_BACAM Type II restriction enzyme BamHI (Gene Name=bamHIR)
[
Back to BioLiP
]