Structure of PDB 2b6g Chain A Binding Site BS01
Receptor Information
>2b6g Chain A (length=81) Species:
4932
(Saccharomyces cerevisiae) [
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NPKSLTDPKLLKNIPMWLKSLRLHKYSDALSGTPWIELIYLDDETLEKKG
VLALGARRKLLKAFGIVIDYKERDLIDRSAY
Ligand information
>2b6g Chain B (length=19) [
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ggaggcucuggcagcuuuc
<<<<<<<.....>>>>>>>
Receptor-Ligand Complex Structure
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PDB
2b6g
RNA recognition by the Vts1p SAM domain
Resolution
N/A
Binding residue
(original residue number in PDB)
Y468 A495 L496 G497 A498
Binding residue
(residue number reindexed from 1)
Y26 A53 L54 G55 A56
Binding affinity
PDBbind-CN
: Kd=30nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003729
mRNA binding
Biological Process
GO:0043488
regulation of mRNA stability
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Molecular Function
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Biological Process
External links
PDB
RCSB:2b6g
,
PDBe:2b6g
,
PDBj:2b6g
PDBsum
2b6g
PubMed
16429155
UniProt
Q08831
|VTS1_YEAST RNA-binding protein VTS1 (Gene Name=VTS1)
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