Structure of PDB 2asl Chain A Binding Site BS01
Receptor Information
>2asl Chain A (length=341) Species:
2287
(Saccharolobus solfataricus) [
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GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEA
RKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIE
IASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVF
AKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVT
MKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGR
TFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
Ligand information
>2asl Chain D (length=14) [
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ggttggatggtagc
Receptor-Ligand Complex Structure
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PDB
2asl
Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
A44 A57 G185 G187 I189 T190 R298 R300 T301 K339
Binding residue
(residue number reindexed from 1)
A44 A57 G185 G187 I189 T190 R298 R300 T301 K339
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0003677
DNA binding
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0046872
metal ion binding
Biological Process
GO:0006260
DNA replication
GO:0006261
DNA-templated DNA replication
GO:0006281
DNA repair
GO:0006974
DNA damage response
GO:0042276
error-prone translesion synthesis
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2asl
,
PDBe:2asl
,
PDBj:2asl
PDBsum
2asl
PubMed
16379496
UniProt
Q97W02
|DPO4_SACS2 DNA polymerase IV (Gene Name=dbh)
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