Structure of PDB 1zvj Chain A Binding Site BS01

Receptor Information

>1zvj Chain A (length=354) Species: 192387 (Alicyclobacillus sendaiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TAYTPLDVAQAYQFPEGLDGQGQCIAIIELGGGYDEASLAQYFASLGVPA
PQVVSVSVDGASNQPTGDPSGPDGEVELDIEVAGALAPGAKFAVYFAPNT
DAGFLDAITTAIHDPTLKPSVVSISWGGPEDSWTSAAIAAMNRAFLDAAA
LGVTVLAAAGNSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASGGRIA
QETVWNDGPDGGATGGGVSRIFPLPAWQEHANVPPSANPGASSGRGVPDL
AGNADPATGYEVVIDGEATVIGGTSAVAPLFAALVARINQKLGKAVGYLN
PTLYQLPADVFHDITEGNNDIANRAQIYQAGPGWDPCTGLGSPIGVRLLQ
ALLP

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

1zvj Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1zvj Processing, catalytic activity and crystal structures of kumamolisin-As with an engineered active site.
Resolution	2.03 Å
Binding residue (original residue number in PDB)	D316 I317 G334 G336 D338 L356 P357
Binding residue (residue number reindexed from 1)	D313 I314 G331 G333 D335 L353 P354
Annotation score	4

Enzymatic activity

Catalytic site (original residue number in PDB)	E78 D82 N164 S278
Catalytic site (residue number reindexed from 1)	E75 D79 N161 S275
Enzyme Commision number	?

Gene Ontology

	Molecular Function
GO:0004252	serine-type endopeptidase activity
GO:0008236	serine-type peptidase activity

	Biological Process
GO:0006508	proteolysis

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Molecular Function

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Biological Process

External links

PDB	RCSB:1zvj, PDBe:1zvj, PDBj:1zvj
PDBsum	1zvj
PubMed	16704427
UniProt	Q8GB88

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