Structure of PDB 1yvd Chain A Binding Site BS01
Receptor Information
>1yvd Chain A (length=166) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQN
ELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVR
ELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKN
AININELFIEISRRIP
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
1yvd Chain A Residue 850 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1yvd
Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Resolution
1.93 Å
Binding residue
(original residue number in PDB)
S19 T37
Binding residue
(residue number reindexed from 1)
S18 T36
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005525
GTP binding
View graph for
Molecular Function
External links
PDB
RCSB:1yvd
,
PDBe:1yvd
,
PDBj:1yvd
PDBsum
1yvd
PubMed
16034420
UniProt
P35285
|RB22A_MOUSE Ras-related protein Rab-22A (Gene Name=Rab22a)
[
Back to BioLiP
]