Structure of PDB 1yvd Chain A Binding Site BS01

Receptor Information
>1yvd Chain A (length=166) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQN
ELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVR
ELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKN
AININELFIEISRRIP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain1yvd Chain A Residue 850 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1yvd Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Resolution1.93 Å
Binding residue
(original residue number in PDB)		S19 T37
Binding residue
(residue number reindexed from 1)		S18 T36
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:1yvd, PDBe:1yvd, PDBj:1yvd
PDBsum1yvd
PubMed16034420
UniProtP35285|RB22A_MOUSE Ras-related protein Rab-22A (Gene Name=Rab22a)

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