Structure of PDB 1yk4 Chain A Binding Site BS01

Receptor Information
>1yk4 Chain A (length=52) Species: 29292 (Pyrococcus abyssi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFER
IE
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain1yk4 Chain A Residue 54 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1yk4 Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin. I. 0.69 A X-ray structure of mutant W4L/R5S.
Resolution0.69 Å
Binding residue
(original residue number in PDB)		C6 C9 C39 C42
Binding residue
(residue number reindexed from 1)		C5 C8 C38 C41
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
Biological Process
GO:0043448 alkane catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:1yk4, PDBe:1yk4, PDBj:1yk4
PDBsum1yk4
PubMed15983423
UniProtQ9V099|RUBR_PYRAB Rubredoxin (Gene Name=rub)

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