Structure of PDB 1y9q Chain A Binding Site BS01

Receptor Information
>1y9q Chain A (length=178) Species: 666 (Vibrio cholerae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTI
ATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTG
LEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEH
IRFFSDQPHGYAAVTEKAVFQNIVAYPR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1y9q Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1y9q Crystal Structure of HTH_3 family Transcriptional Regulator from Vibrio cholerae
Resolution1.9 Å
Binding residue
(original residue number in PDB)		H122 E128 H162 Y164
Binding residue
(residue number reindexed from 1)		H119 E125 H159 Y161
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1y9q, PDBe:1y9q, PDBj:1y9q
PDBsum1y9q
PubMed
UniProtQ9KQN0

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