Structure of PDB 1w7l Chain A Binding Site BS01
Receptor Information
>1w7l Chain A (length=415) Species:
9606
(Homo sapiens) [
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QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHA
VSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA
LFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPGELGS
SSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH
DVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKV
GWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYF
VQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPG
AVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEA
TLQAMDEKLRKWKVE
Ligand information
Ligand ID
PLP
InChI
InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKey
NGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04
O=P(O)(O)OCc1cnc(c(O)c1C=O)C
Formula
C8 H10 N O6 P
Name
PYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBL
CHEMBL82202
DrugBank
DB00114
ZINC
ZINC000001532514
PDB chain
1w7l Chain A Residue 1247 [
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Receptor-Ligand Complex Structure
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PDB
1w7l
Crystal Structure of Human Kynurenine Aminotransferase I
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
G99 G100 Y101 F125 N181 N185 D213 V215 Y216 S244 K247 K255
Binding residue
(residue number reindexed from 1)
G96 G97 Y98 F122 N175 N179 D207 V209 Y210 S238 K241 K249
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
F125 D213 V215 K247
Catalytic site (residue number reindexed from 1)
F122 D207 V209 K241
Enzyme Commision number
2.6.1.64
: glutamine--phenylpyruvate transaminase.
2.6.1.7
: kynurenine--oxoglutarate transaminase.
4.4.1.13
: cysteine-S-conjugate beta-lyase.
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0008483
transaminase activity
GO:0016212
kynurenine-oxoglutarate transaminase activity
GO:0016829
lyase activity
GO:0030170
pyridoxal phosphate binding
GO:0042803
protein homodimerization activity
GO:0047316
glutamine-phenylpyruvate transaminase activity
GO:0047804
cysteine-S-conjugate beta-lyase activity
Biological Process
GO:0009058
biosynthetic process
GO:0009617
response to bacterium
GO:0070189
kynurenine metabolic process
GO:0097053
L-kynurenine catabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005739
mitochondrion
GO:0005829
cytosol
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Molecular Function
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Cellular Component
External links
PDB
RCSB:1w7l
,
PDBe:1w7l
,
PDBj:1w7l
PDBsum
1w7l
PubMed
15364907
UniProt
Q16773
|KAT1_HUMAN Kynurenine--oxoglutarate transaminase 1 (Gene Name=KYAT1)
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