Structure of PDB 1vq2 Chain A Binding Site BS01

Receptor Information
>1vq2 Chain A (length=173) Species: 10665 (Tequatrovirus T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKASTVLQIAYLVSQESKCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCC
DYAAEQGWLLNKRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSI
EGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNKPGWDDILRNAGIE
VFNVPKKNLNKLNWENINEFCGE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1vq2 Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1vq2 Three-Dimensional Structure of the R115E Mutant of T4-Bacteriophage 2'-Deoxycytidylate Deaminase
Resolution2.2 Å
Binding residue
(original residue number in PDB)		H104 C132 C135
Binding residue
(residue number reindexed from 1)		H84 C112 C115
Annotation score1
Enzymatic activity
Enzyme Commision number 3.5.4.12: dCMP deaminase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004132 dCMP deaminase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006220 pyrimidine nucleotide metabolic process
GO:0009165 nucleotide biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:1vq2, PDBe:1vq2, PDBj:1vq2
PDBsum1vq2
PubMed15504034
UniProtP16006|DCTD_BPT4 Deoxycytidylate deaminase (Gene Name=CD)

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