Structure of PDB 1vli Chain A Binding Site BS01

Receptor Information

>1vli Chain A (length=358) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AAFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKF
QMFQADRMYQKDPDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVC
DEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISD
VHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIG
FSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPDELKEM
VDGIRKTEAELKQGITKPVSEKLLGSSYKTTTAIEGEIRNFAYRGIFTTA
PIQKGEAFSEDNIAVLRPGQKPQGLHPRFFELLTSGVRAVRDIPADTGIV
WDDILLKD

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

1vli Chain A Residue 374 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1vli Crystal structure of Spore coat polysaccharide biosynthesis protein spsE (BSU37870) from Bacillus subtilis at 2.38 A resolution
Resolution	2.38 Å
Binding residue (original residue number in PDB)	H214 H236
Binding residue (residue number reindexed from 1)	H204 H226
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0047444	N-acylneuraminate-9-phosphate synthase activity

	Biological Process
GO:0016051	carbohydrate biosynthetic process
GO:0070085	glycosylation

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Molecular Function

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Biological Process

External links

PDB	RCSB:1vli, PDBe:1vli, PDBj:1vli
PDBsum	1vli
PubMed
UniProt	P39625\|SPSE_BACSU Spore coat polysaccharide biosynthesis protein SpsE (Gene Name=spsE)

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