Structure of PDB 1vei Chain A Binding Site BS01

Receptor Information
>1vei Chain A (length=175) Species: 1772 (Mycolicibacterium smegmatis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTSFTIPGLSDKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGV
HEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERD
TVQAHLAALDLVYNGVIEDTRKSIEKLEDLDLVSQDLLIAHAGELEKFQW
FVRAHLESAGGQLTHEGQSTEKGAA
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain1vei Chain A Residue 184 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1vei X-ray Analysis of Mycobacterium smegmatis Dps and a Comparative Study Involving Other Dps and Dps-like Molecules
Resolution2.85 Å
Binding residue
(original residue number in PDB)		D66 E70
Binding residue
(residue number reindexed from 1)		D66 E70
Annotation score5
Enzymatic activity
Enzyme Commision number 1.16.-.-
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008199 ferric iron binding
GO:0016491 oxidoreductase activity
GO:0016722 oxidoreductase activity, acting on metal ions
GO:0046872 metal ion binding
Biological Process
GO:0006879 intracellular iron ion homeostasis
Cellular Component
GO:0005737 cytoplasm
GO:0009295 nucleoid

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1vei, PDBe:1vei, PDBj:1vei
PDBsum1vei
PubMed15178251
UniProtP0C558|DPS_MYCSM DNA protection during starvation protein (Gene Name=dps)

[Back to BioLiP]