Structure of PDB 1vad Chain A Binding Site BS01

Receptor Information
>1vad Chain A (length=274) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRW
Ligand information
>1vad Chain P (length=9) Species: 4932 (Saccharomyces cerevisiae) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
SRDHSRTPM
Receptor-Ligand Complex Structure
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PDB1vad Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		Y7 E24 E63 K66 N70 D77 L81 Y84 Y116 T143 K146 W147 E152 R155 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 E24 E63 K66 N70 D77 L81 Y84 Y116 T143 K146 W147 E152 R155 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1vad, PDBe:1vad, PDBj:1vad
PDBsum1vad
PubMed7708669
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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