Structure of PDB 1u6p Chain A Binding Site BS01

Receptor Information
>1u6p Chain A (length=56) Species: 11801 (Moloney murine leukemia virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPR
PQTSLL
Ligand information
>1u6p Chain B (length=101) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcgguacuaguugagaaacuagcucuguaucuggcggacccguggugga
acugugaaguucggaacacccggccgcaacccugggagaggucccagggu
u
.<<<<..<<<<<<....>>>>>>..>>>>.....<<<<..<<<.<<<<<<
<<<....>>>>>....>>>>>>>>>>><<<<<<<<<<....>>>>>>>>>
>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1u6p Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus
ResolutionN/A
Binding residue
(original residue number in PDB)		R18 L21 D22 R23 Q25 A27 Y28 W35 A36 K37 K41 K42
Binding residue
(residue number reindexed from 1)		R18 L21 D22 R23 Q25 A27 Y28 W35 A36 K37 K41 K42
Binding affinityPDBbind-CN: Kd=75nM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:1u6p, PDBe:1u6p, PDBj:1u6p
PDBsum1u6p
PubMed15457265
UniProtP03332|GAG_MLVMS Gag polyprotein (Gene Name=gag)

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