Structure of PDB 1t4w Chain A Binding Site BS01
Receptor Information
>1t4w Chain A (length=196) Species:
6239
(Caenorhabditis elegans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EKWMEIDVLKQKVAKSSDMAFAISSEHEKYLWTKMGCLVPIQVKWKLDKR
HFNSNLSLRIRFVKYDKKENVEYAIRNPRSDVMKCRSHTEREQHFPFDSF
FYIRNSEHEFSYSAEKGSTFTLIMYPGAVQANFDIIFMCQEKCLDLDDRR
KTMCLAVFLDDENGNEILHAYIKQVRIVAYPRRDWKNFCEREDAKQ
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
1t4w Chain A Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1t4w
Structural Differences in the DNA Binding Domains of Human p53 and Its C. elegans Ortholog Cep-1.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
C307 H310 C361 C365
Binding residue
(residue number reindexed from 1)
C85 H88 C139 C143
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1t4w
,
PDBe:1t4w
,
PDBj:1t4w
PDBsum
1t4w
PubMed
15242600
UniProt
Q20646
|CEP1_CAEEL Transcription factor cep-1 (Gene Name=cep-1)
[
Back to BioLiP
]