Structure of PDB 1sxw Chain A Binding Site BS01
Receptor Information
>1sxw Chain A (length=184) Species:
13249
(Rhodnius prolixus) [
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ACTKNAIAQTGFNKDKYFNGDVWYVTDYLALEPDDVPKRYCAALAAGTAS
GKLKEALYHYDPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAVT
AGNYYTFTVMYADDSSALIHTCLHKGNKDLGDLYAVLNRNKDAAAGDKVK
SAVSAATLEFSKFISTKENNCAYDNDSLKSLLTK
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1sxw Chain A Residue 185 [
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Receptor-Ligand Complex Structure
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PDB
1sxw
Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Resolution
1.05 Å
Binding residue
(original residue number in PDB)
Y28 V36 Y40 L57 H59 F68 D70 F86 K88 Y105 L123 K125 K128 L133
Binding residue
(residue number reindexed from 1)
Y28 V36 Y40 L57 H59 F68 D70 F86 K88 Y105 L123 K125 K128 L133
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.7.6.1
: nitrite dismutase.
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051381
histamine binding
GO:0070026
nitric oxide binding
Biological Process
GO:0042311
vasodilation
Cellular Component
GO:0005576
extracellular region
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1sxw
,
PDBe:1sxw
,
PDBj:1sxw
PDBsum
1sxw
PubMed
15157102
UniProt
Q94734
|NP4_RHOPR Nitrophorin-4
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